STRINGSTRING
EIJ34364.1 EIJ34364.1 EIJ34160.1 EIJ34160.1 EIJ33186.1 EIJ33186.1 EIJ35258.1 EIJ35258.1 EIJ35259.1 EIJ35259.1 EIJ34362.1 EIJ34362.1 EIJ35872.1 EIJ35872.1 EIJ32790.1 EIJ32790.1 EIJ36029.1 EIJ36029.1 EIJ36854.1 EIJ36854.1 EIJ35570.1 EIJ35570.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
EIJ34364.1Conserved repeat domain protein; PFAM: Cellulase (glycosyl hydrolase family 5); Domain of unknown function DUF11; TIGRFAM: conserved repeat domain; COGs: COG2730 Endoglucanase; InterPro IPR003305:IPR001547:IPR001434; KEGG: ttu:TERTU_1696 putative lipoprotein; PFAM: Glycoside hydrolase, family 5; Carbohydrate-binding, CenC-like; Protein of unknown function DUF11; SPTR: Putative lipoprotein; TIGRFAM: Protein of unknown function DUF11. (977 aa)    
Predicted Functional Partners:
EIJ34160.1
PFAM: Glycosyl hydrolases family 8; Glycosyl hydrolases family 18; COGs: COG3325 Chitinase; InterPro IPR001223:IPR002037:IPR003367:IPR011583; KEGG: hch:HCH_04793 chitinase; PFAM: Glycoside hydrolase, family 18, catalytic domain; Glycoside hydrolase, family 8; Thrombospondin, type 3-like repeat; SMART: Chitinase II; SPTR: Chitinase.
 
  
 0.906
EIJ33186.1
KEGG: npu:Npun_F1375 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.799
EIJ35258.1
KEGG: amt:Amet_3422 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.768
EIJ35259.1
PFAM: N-formylglutamate amidohydrolase; InterPro IPR007709; KEGG: pmx:PERMA_1250 N-formylglutamate amidohydrolase; PFAM: N-formylglutamate amidohydrolase; SPTR: N-formylglutamate amidohydrolase.
  
     0.768
EIJ34362.1
PFAM: Glycosyl hydrolase family 9; N-terminal ig-like domain of cellulase; InterPro IPR004197:IPR001701; KEGG: sde:Sde_0558 regulatory protein, LacI; PFAM: Glycoside hydrolase, family 9; Glycoside hydrolase, family 9, N-terminal, Ig-like; SPTR: Putative inverting b-glycosidase.
 
 
0.762
EIJ35872.1
KEGG: bbe:BBR47_17350 hypothetical protein; SPTR: Kinesin, putative.
 
  
 0.758
EIJ32790.1
PFAM: Cna protein B-type domain; Proprotein convertase P-domain; InterPro IPR002884:IPR008454:IPR002126:IPR006626; KEGG: hau:Haur_1649 Cna B domain-containing protein; PFAM: Collagen-binding surface protein Cna-like, B region; Proprotein convertase, P; Cadherin; SMART: Cadherin; Parallel beta-helix repeat; SPTR: Cna B domain protein.
  
 
  0.747
EIJ36029.1
PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain; InterPro IPR001434; KEGG: rba:RB12697 adhesin; PFAM: Protein of unknown function DUF11; SPTR: Putative uncharacterized protein; TIGRFAM: Protein of unknown function DUF11.
  
 
  0.737
EIJ36854.1
Beta-hexosaminidase; PFAM: Glycosyl hydrolase family 3 N terminal domain; COGs: COG1472 Beta-glucosidase-related glycosidase; HAMAP: Beta-hexosaminidase; InterPro IPR001764; KEGG: alv:Alvin_0490 glycoside hydrolase family 3 domain-containing protein; PFAM: Glycoside hydrolase, family 3, N-terminal; SPTR: Beta-hexosaminidase.
    
 0.669
EIJ35570.1
Cellulose-binding family II; PFAM: Cellulose binding domain; Cytochrome c; Protein of unknown function (DUF1592); Protein of unknown function (DUF1587); Protein of unknown function (DUF1588); Protein of unknown function (DUF1595); Fibronectin type III domain; Protein of unknown function (DUF1585); COGs: COG2863 Cytochrome c553; InterProIPR001919:IPR003961:IPR003088:IPR013036:IPR 013043:IPR013042:IPR013039; KEGG: mca:MCA1493 cellulose-binding domain-containing protein; PFAM: Cellulose-binding domain, family II, bacterial type; Fibronectin, type III; Cytochrome c, class I; Protein of unk [...]
 
 
 0.666
Your Current Organism:
Thiothrix nivea
NCBI taxonomy Id: 870187
Other names: T. nivea DSM 5205, Thiothrix nivea DSM 5205, Thiothrix nivea JP2, Thiothrix nivea str. DSM 5205, Thiothrix nivea strain DSM 5205
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